BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009A08LP1|AL425965
(471 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1129 801 0.0
>3x_Contig1129
Length = 3849
Score = 801 bits (403), Expect = 0.0
Identities = 430/439 (97%), Gaps = 2/439 (0%)
Strand = Plus / Minus
Query: 1 agtttattgagtngacagaatacacaatccaacaagaacagataatccgtgagaaaataa 60
|||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1733 agtttattgagttgacagattacacaatccaacaagaacagataatccgtgagaaaataa 1674
Query: 61 tagcgtagtatagagacggaatagtatctaagtgcctagaaatctctttcttgttactac 120
|||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1673 tagcgtagaa--gagacggaatagtatctaagtccctagaaatctctttcttgttactac 1616
Query: 121 aaaggaggttattgttacctcggctggagataagtgtgtacggcaccttacagagctctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1615 aaaggaggttattgttacctcggctggagataagtgtgtacggcaccttacagagctctg 1556
Query: 181 tacgtatgagttagggattcgagaaagatagatcaattttgtagttgatttttgaggtaa 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1555 tacgtatgagtaagggattcgagaaagatagatcaattttgtagttgatttttgaggtaa 1496
Query: 241 tttatttcggtttattatcgattgcyagttgttaatcttttcttaccggttttcgtctgt 300
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1495 tttatttcggtttattatcgattgctagttgttaatcttttcttaccggttttcgtctgt 1436
Query: 301 tgaagcactctattattagctggagtattccatatgttcccgtagcctacatcaaaaggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1435 tgaagcactctattattagctggagtattccatatgttcccgtagcctacatcaaaaggg 1376
Query: 361 agtatcgttgctttgctgcgacgtcaaaaagttcacctcgatttaaagtgcctatatata 420
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1375 agtttcgttgctttgctgcgacgtcaaaaagttcacctcgatttaaagtgcctatatata 1316
Query: 421 tatatatatatatatatat 439
|||||||||||||||||||
Sbjct: 1315 tatatatatatatatatat 1297
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,744
Number of Sequences: 1807
Number of extensions: 12744
Number of successful extensions: 5116
Number of sequences better than 1.0e-20: 1
length of query: 471
length of database: 10,358,551
effective HSP length: 16
effective length of query: 455
effective length of database: 10,329,639
effective search space: 4699985745
effective search space used: 4699985745
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)